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Cluster: Rep_807_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_807_c_61 Rep_807_c_61_3 2157 3059 + 3.A.1.148.3
TC Rep_807_c_61 Rep_807_c_61_4 3072 6656 + 3.A.1.145.3
NULL(UNKNOWN) Rep_807_c_61 Rep_807_c_61_5 6772 7086 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_807_c_61 Rep_807_c_61_6 7238 7624 - SseB
CAZyme Rep_807_c_61 Rep_807_c_61_7 7747 9462 - GH13_2
TC Rep_807_c_61 Rep_807_c_61_8 9462 10949 - 2.A.2.6.3
NULL(UNKNOWN) Rep_807_c_61 Rep_807_c_61_9 10946 13150 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_807_c_61 Rep_807_c_61_10 13388 15454 + GH97
TC Rep_807_c_61 Rep_807_c_61_11 15742 18498 + 1.B.14.12.1
CAZyme Rep_807_c_61 Rep_807_c_61_12 18755 20368 - GH13_23
Gene ID: Rep_807_c_61_3
Type: TC
Location: 2157 - 3059 (+)
Gene ID: Rep_807_c_61_4
Type: TC
Location: 3072 - 6656 (+)
Gene ID: Rep_807_c_61_5
Type:
Location: 6772 - 7086 (-)
Gene ID: Rep_807_c_61_6
Type: pfam
Location: 7238 - 7624 (-)
Gene ID: Rep_807_c_61_7
Type: CAZyme
Location: 7747 - 9462 (-)
Gene ID: Rep_807_c_61_8
Type: TC
Location: 9462 - 10949 (-)
Gene ID: Rep_807_c_61_9
Type:
Location: 10946 - 13150 (-)
Gene ID: Rep_807_c_61_10
Type: CAZyme
Location: 13388 - 15454 (+)
Gene ID: Rep_807_c_61_11
Type: TC
Location: 15742 - 18498 (+)
Gene ID: Rep_807_c_61_12
Type: CAZyme
Location: 18755 - 20368 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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