Cluster: Rep_807_CGC23
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_807
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_807_c_59 | Rep_807_c_59_2 | 774 | 2963 | - | 1.B.14.1.7 |
| pfam | Rep_807_c_59 | Rep_807_c_59_3 | 3278 | 4402 | - | APH |
| pfam | Rep_807_c_59 | Rep_807_c_59_4 | 4531 | 4938 | - | Rick_17kDa_Anti |
| CAZyme | Rep_807_c_59 | Rep_807_c_59_5 | 5186 | 7177 | - | GH23 |
| NULL(UNKNOWN) | Rep_807_c_59 | Rep_807_c_59_6 | 7290 | 8060 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_807_c_59 | Rep_807_c_59_7 | 8439 | 9077 | - | GerE |
| TC | Rep_807_c_59 | Rep_807_c_59_8 | 9153 | 12752 | + | 2.A.21.9.2 |
Gene ID: Rep_807_c_59_2
Type: TC
Location: 774 - 2963 (-)
Type: TC
Location: 774 - 2963 (-)
Gene ID: Rep_807_c_59_3
Type: pfam
Location: 3278 - 4402 (-)
Type: pfam
Location: 3278 - 4402 (-)
Gene ID: Rep_807_c_59_4
Type: pfam
Location: 4531 - 4938 (-)
Type: pfam
Location: 4531 - 4938 (-)
Gene ID: Rep_807_c_59_5
Type: CAZyme
Location: 5186 - 7177 (-)
Type: CAZyme
Location: 5186 - 7177 (-)
Gene ID: Rep_807_c_59_6
Type:
Location: 7290 - 8060 (-)
Type:
Location: 7290 - 8060 (-)
Gene ID: Rep_807_c_59_7
Type: TF
Location: 8439 - 9077 (-)
Type: TF
Location: 8439 - 9077 (-)
Gene ID: Rep_807_c_59_8
Type: TC
Location: 9153 - 12752 (+)
Type: TC
Location: 9153 - 12752 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.