Cluster: Rep_807_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_807
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_807_c_30 | Rep_807_c_30_10 | 7782 | 9446 | + | 3.A.1.120.6 |
| TC | Rep_807_c_30 | Rep_807_c_30_11 | 9539 | 10855 | + | 2.A.40.7.6 |
| pfam | Rep_807_c_30 | Rep_807_c_30_12 | 10866 | 11942 | + | DUF4434 |
| pfam | Rep_807_c_30 | Rep_807_c_30_13 | 11936 | 14770 | - | NfrA_C |
| CAZyme | Rep_807_c_30 | Rep_807_c_30_14 | 14767 | 16914 | - | GT2 |
Gene ID: Rep_807_c_30_10
Type: TC
Location: 7782 - 9446 (+)
Type: TC
Location: 7782 - 9446 (+)
Gene ID: Rep_807_c_30_11
Type: TC
Location: 9539 - 10855 (+)
Type: TC
Location: 9539 - 10855 (+)
Gene ID: Rep_807_c_30_12
Type: pfam
Location: 10866 - 11942 (+)
Type: pfam
Location: 10866 - 11942 (+)
Gene ID: Rep_807_c_30_13
Type: pfam
Location: 11936 - 14770 (-)
Type: pfam
Location: 11936 - 14770 (-)
Gene ID: Rep_807_c_30_14
Type: CAZyme
Location: 14767 - 16914 (-)
Type: CAZyme
Location: 14767 - 16914 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.