Cluster: Rep_807_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_807
- CGC Family ID: CGCFAM_01353
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_807_c_28 | Rep_807_c_28_9 | 6946 | 8358 | + | 3.A.1.103.6 |
| pfam | Rep_807_c_28 | Rep_807_c_28_10 | 8414 | 9589 | + | Ubie_methyltran | CMAS | Methyltransf_29 | MTS | MetW | Methyltransf_9 | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | Rep_807_c_28 | Rep_807_c_28_11 | 9593 | 12958 | + | GT2 | GT4 |
Gene ID: Rep_807_c_28_9
Type: TC
Location: 6946 - 8358 (+)
Type: TC
Location: 6946 - 8358 (+)
Gene ID: Rep_807_c_28_10
Type: pfam
Location: 8414 - 9589 (+)
Type: pfam
Location: 8414 - 9589 (+)
Gene ID: Rep_807_c_28_11
Type: CAZyme
Location: 9593 - 12958 (+)
Type: CAZyme
Location: 9593 - 12958 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas maltophilia_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.