Cluster: Rep_806_CGC46
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_806
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_806_c_86 | Rep_806_c_86_3 | 1266 | 1901 | - | 1.A.12.3.1 |
| pfam | Rep_806_c_86 | Rep_806_c_86_4 | 2062 | 2808 | - | Cytochrom_C1 | Cytochrom_C1 |
| TC | Rep_806_c_86 | Rep_806_c_86_5 | 2801 | 4060 | - | 3.D.3.1.1 |
| TC | Rep_806_c_86 | Rep_806_c_86_6 | 4063 | 4683 | - | 3.D.3.1.1 |
| CAZyme | Rep_806_c_86 | Rep_806_c_86_7 | 4855 | 5502 | - | GH23 |
Gene ID: Rep_806_c_86_3
Type: TC
Location: 1266 - 1901 (-)
Type: TC
Location: 1266 - 1901 (-)
Gene ID: Rep_806_c_86_4
Type: pfam
Location: 2062 - 2808 (-)
Type: pfam
Location: 2062 - 2808 (-)
Gene ID: Rep_806_c_86_5
Type: TC
Location: 2801 - 4060 (-)
Type: TC
Location: 2801 - 4060 (-)
Gene ID: Rep_806_c_86_6
Type: TC
Location: 4063 - 4683 (-)
Type: TC
Location: 4063 - 4683 (-)
Gene ID: Rep_806_c_86_7
Type: CAZyme
Location: 4855 - 5502 (-)
Type: CAZyme
Location: 4855 - 5502 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas bentonitica_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.