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Cluster: Rep_806_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_806_c_59 Rep_806_c_59_2 208 1821 + GH13_23
TC Rep_806_c_59 Rep_806_c_59_3 2246 5005 - 1.B.14.12.1
CAZyme Rep_806_c_59 Rep_806_c_59_4 5353 7419 - GH97
NULL(UNKNOWN) Rep_806_c_59 Rep_806_c_59_5 7653 9854 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_806_c_59 Rep_806_c_59_6 9851 11338 + 2.A.2.6.3
CAZyme Rep_806_c_59 Rep_806_c_59_7 11338 13059 + GH13_2
pfam Rep_806_c_59 Rep_806_c_59_8 13151 13648 + Acetyltransf_1
pfam Rep_806_c_59 Rep_806_c_59_9 13720 14115 + SseB
TC Rep_806_c_59 Rep_806_c_59_10 14125 17709 - 3.A.1.145.3
TC Rep_806_c_59 Rep_806_c_59_11 17723 18616 - 3.A.1.148.3
Gene ID: Rep_806_c_59_2
Type: CAZyme
Location: 208 - 1821 (+)
Gene ID: Rep_806_c_59_3
Type: TC
Location: 2246 - 5005 (-)
Gene ID: Rep_806_c_59_4
Type: CAZyme
Location: 5353 - 7419 (-)
Gene ID: Rep_806_c_59_5
Type:
Location: 7653 - 9854 (+)
Gene ID: Rep_806_c_59_6
Type: TC
Location: 9851 - 11338 (+)
Gene ID: Rep_806_c_59_7
Type: CAZyme
Location: 11338 - 13059 (+)
Gene ID: Rep_806_c_59_8
Type: pfam
Location: 13151 - 13648 (+)
Gene ID: Rep_806_c_59_9
Type: pfam
Location: 13720 - 14115 (+)
Gene ID: Rep_806_c_59_10
Type: TC
Location: 14125 - 17709 (-)
Gene ID: Rep_806_c_59_11
Type: TC
Location: 17723 - 18616 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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