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Cluster: Rep_806_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_806_c_54 Rep_806_c_54_5 3936 5366 - 2.A.1.1.32
NULL(UNKNOWN) Rep_806_c_54 Rep_806_c_54_6 5398 6738 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_806_c_54 Rep_806_c_54_7 6735 8258 - FGGY_N | FGGY_C
CAZyme Rep_806_c_54 Rep_806_c_54_8 8255 10633 - GH95
CAZyme Rep_806_c_54 Rep_806_c_54_9 10735 13581 - GH31_4
CAZyme Rep_806_c_54 Rep_806_c_54_10 13628 15337 - GH35
CAZyme Rep_806_c_54 Rep_806_c_54_11 15355 17262 - CE20 | CE20
CAZyme Rep_806_c_54 Rep_806_c_54_12 17259 19496 - GH74
TC Rep_806_c_54 Rep_806_c_54_13 19622 22324 - 1.B.14.12.2
Gene ID: Rep_806_c_54_5
Type: TC
Location: 3936 - 5366 (-)
Gene ID: Rep_806_c_54_6
Type:
Location: 5398 - 6738 (-)
Gene ID: Rep_806_c_54_7
Type: pfam
Location: 6735 - 8258 (-)
Gene ID: Rep_806_c_54_8
Type: CAZyme
Location: 8255 - 10633 (-)
Gene ID: Rep_806_c_54_9
Type: CAZyme
Location: 10735 - 13581 (-)
Gene ID: Rep_806_c_54_10
Type: CAZyme
Location: 13628 - 15337 (-)
Gene ID: Rep_806_c_54_11
Type: CAZyme
Location: 15355 - 17262 (-)
Gene ID: Rep_806_c_54_12
Type: CAZyme
Location: 17259 - 19496 (-)
Gene ID: Rep_806_c_54_13
Type: TC
Location: 19622 - 22324 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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