Cluster: Rep_806_CGC40
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_806
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_806_c_52 | Rep_806_c_52_4 | 3204 | 3794 | - | AA6 |
| TC | Rep_806_c_52 | Rep_806_c_52_5 | 3927 | 5201 | + | 9.B.126.2.1 |
| pfam | Rep_806_c_52 | Rep_806_c_52_6 | 5198 | 5761 | + | Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_8 |
| pfam | Rep_806_c_52 | Rep_806_c_52_7 | 5873 | 6652 | - | PPK2 |
| CAZyme | Rep_806_c_52 | Rep_806_c_52_8 | 6704 | 8413 | - | GT41 |
Gene ID: Rep_806_c_52_4
Type: CAZyme
Location: 3204 - 3794 (-)
Type: CAZyme
Location: 3204 - 3794 (-)
Gene ID: Rep_806_c_52_5
Type: TC
Location: 3927 - 5201 (+)
Type: TC
Location: 3927 - 5201 (+)
Gene ID: Rep_806_c_52_6
Type: pfam
Location: 5198 - 5761 (+)
Type: pfam
Location: 5198 - 5761 (+)
Gene ID: Rep_806_c_52_7
Type: pfam
Location: 5873 - 6652 (-)
Type: pfam
Location: 5873 - 6652 (-)
Gene ID: Rep_806_c_52_8
Type: CAZyme
Location: 6704 - 8413 (-)
Type: CAZyme
Location: 6704 - 8413 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas bentonitica_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.