Cluster: Rep_806_CGC37
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_806
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_806_c_41 | Rep_806_c_41_1 | 241 | 2973 | - | 3.A.5.1.1 |
| STP | Rep_806_c_41 | Rep_806_c_41_2 | 3142 | 4092 | - | Peptidase_M23 |
| pfam | Rep_806_c_41 | Rep_806_c_41_3 | 4105 | 4545 | + | DciA |
| CAZyme | Rep_806_c_41 | Rep_806_c_41_4 | 4841 | 5752 | - | CE11 |
Gene ID: Rep_806_c_41_1
Type: TC
Location: 241 - 2973 (-)
Type: TC
Location: 241 - 2973 (-)
Gene ID: Rep_806_c_41_2
Type: STP
Location: 3142 - 4092 (-)
Type: STP
Location: 3142 - 4092 (-)
Gene ID: Rep_806_c_41_3
Type: pfam
Location: 4105 - 4545 (+)
Type: pfam
Location: 4105 - 4545 (+)
Gene ID: Rep_806_c_41_4
Type: CAZyme
Location: 4841 - 5752 (-)
Type: CAZyme
Location: 4841 - 5752 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas bentonitica_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.