Cluster: Rep_806_CGC36
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_806
- CGC Family ID: CGCFAM_02182
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_806_c_38 | Rep_806_c_38_35 | 32459 | 33814 | - | 2.A.1.3.51 |
| TF | Rep_806_c_38 | Rep_806_c_38_36 | 33921 | 34844 | + | HTH_1 |
| CAZyme | Rep_806_c_38 | Rep_806_c_38_37 | 34883 | 37702 | - | GH3 |
Gene ID: Rep_806_c_38_35
Type: TC
Location: 32459 - 33814 (-)
Type: TC
Location: 32459 - 33814 (-)
Gene ID: Rep_806_c_38_36
Type: TF
Location: 33921 - 34844 (+)
Type: TF
Location: 33921 - 34844 (+)
Gene ID: Rep_806_c_38_37
Type: CAZyme
Location: 34883 - 37702 (-)
Type: CAZyme
Location: 34883 - 37702 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas bentonitica_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.