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Cluster: Rep_806_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_806_c_29 Rep_806_c_29_31 29742 30881 - 2.A.1.60.3
TF Rep_806_c_29 Rep_806_c_29_32 30907 31689 - HTH_DeoR
CAZyme Rep_806_c_29 Rep_806_c_29_33 32297 33856 + GT5
CAZyme Rep_806_c_29 Rep_806_c_29_34 33853 36093 + CBM48 | GH13_9
CAZyme Rep_806_c_29 Rep_806_c_29_35 36090 37826 + GH13_10
CAZyme Rep_806_c_29 Rep_806_c_29_36 37823 39715 + GH77
CAZyme Rep_806_c_29 Rep_806_c_29_37 39717 42263 + GH13_26
pfam Rep_806_c_29 Rep_806_c_29_38 42274 42438 + DUF2934
CAZyme Rep_806_c_29 Rep_806_c_29_39 42435 44570 + CBM48 | GH13_11
Gene ID: Rep_806_c_29_31
Type: TC
Location: 29742 - 30881 (-)
Gene ID: Rep_806_c_29_32
Type: TF
Location: 30907 - 31689 (-)
Gene ID: Rep_806_c_29_33
Type: CAZyme
Location: 32297 - 33856 (+)
Gene ID: Rep_806_c_29_34
Type: CAZyme
Location: 33853 - 36093 (+)
Gene ID: Rep_806_c_29_35
Type: CAZyme
Location: 36090 - 37826 (+)
Gene ID: Rep_806_c_29_36
Type: CAZyme
Location: 37823 - 39715 (+)
Gene ID: Rep_806_c_29_37
Type: CAZyme
Location: 39717 - 42263 (+)
Gene ID: Rep_806_c_29_38
Type: pfam
Location: 42274 - 42438 (+)
Gene ID: Rep_806_c_29_39
Type: CAZyme
Location: 42435 - 44570 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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