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Cluster: Rep_806_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_806_c_3 Rep_806_c_3_82 96220 98865 - GH2
pfam Rep_806_c_3 Rep_806_c_3_83 99018 100211 - GlcNAc_2-epim
STP Rep_806_c_3 Rep_806_c_3_84 100208 101203 - PfkB
TC Rep_806_c_3 Rep_806_c_3_85 101211 102521 - 2.A.1.7.10
TF Rep_806_c_3 Rep_806_c_3_86 102566 103633 - LacI
NULL(UNKNOWN) Rep_806_c_3 Rep_806_c_3_87 103643 103732 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_806_c_3 Rep_806_c_3_88 103729 106224 - GH92
TC Rep_806_c_3 Rep_806_c_3_89 106794 109877 + 1.B.14.12.2
TC Rep_806_c_3 Rep_806_c_3_90 109956 110687 - 9.B.158.1.1
Gene ID: Rep_806_c_3_82
Type: CAZyme
Location: 96220 - 98865 (-)
Gene ID: Rep_806_c_3_83
Type: pfam
Location: 99018 - 100211 (-)
Gene ID: Rep_806_c_3_84
Type: STP
Location: 100208 - 101203 (-)
Gene ID: Rep_806_c_3_85
Type: TC
Location: 101211 - 102521 (-)
Gene ID: Rep_806_c_3_86
Type: TF
Location: 102566 - 103633 (-)
Gene ID: Rep_806_c_3_87
Type:
Location: 103643 - 103732 (-)
Gene ID: Rep_806_c_3_88
Type: CAZyme
Location: 103729 - 106224 (-)
Gene ID: Rep_806_c_3_89
Type: TC
Location: 106794 - 109877 (+)
Gene ID: Rep_806_c_3_90
Type: TC
Location: 109956 - 110687 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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