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Cluster: Rep_806_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_806_c_25 Rep_806_c_25_24 31191 32366 + 2.A.1.36.3
TC Rep_806_c_25 Rep_806_c_25_25 32454 33152 - 1.B.71.1.4
pfam Rep_806_c_25 Rep_806_c_25_26 33328 33717 + DUF6165
TF Rep_806_c_25 Rep_806_c_25_27 33739 34485 - GntR
TC Rep_806_c_25 Rep_806_c_25_28 34572 37463 - 1.B.14.12.1
CAZyme Rep_806_c_25 Rep_806_c_25_29 37745 39970 + PL6 | PL6_1
CAZyme Rep_806_c_25 Rep_806_c_25_30 39967 42207 + PL17 | PL17_2
TC Rep_806_c_25 Rep_806_c_25_31 42204 43496 + 2.A.1.14.25
Gene ID: Rep_806_c_25_24
Type: TC
Location: 31191 - 32366 (+)
Gene ID: Rep_806_c_25_25
Type: TC
Location: 32454 - 33152 (-)
Gene ID: Rep_806_c_25_26
Type: pfam
Location: 33328 - 33717 (+)
Gene ID: Rep_806_c_25_27
Type: TF
Location: 33739 - 34485 (-)
Gene ID: Rep_806_c_25_28
Type: TC
Location: 34572 - 37463 (-)
Gene ID: Rep_806_c_25_29
Type: CAZyme
Location: 37745 - 39970 (+)
Gene ID: Rep_806_c_25_30
Type: CAZyme
Location: 39967 - 42207 (+)
Gene ID: Rep_806_c_25_31
Type: TC
Location: 42204 - 43496 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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