Cluster: Rep_806_CGC26
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_806
- CGC Family ID: CGCFAM_06242
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_806_c_23 | Rep_806_c_23_34 | 43655 | 43879 | + | 2.A.1.6.4 |
| TC | Rep_806_c_23 | Rep_806_c_23_35 | 43903 | 45141 | + | 2.A.1.6.4 |
| CAZyme | Rep_806_c_23 | Rep_806_c_23_36 | 45284 | 47626 | + | GH92 |
Gene ID: Rep_806_c_23_34
Type: TC
Location: 43655 - 43879 (+)
Type: TC
Location: 43655 - 43879 (+)
Gene ID: Rep_806_c_23_35
Type: TC
Location: 43903 - 45141 (+)
Type: TC
Location: 43903 - 45141 (+)
Gene ID: Rep_806_c_23_36
Type: CAZyme
Location: 45284 - 47626 (+)
Type: CAZyme
Location: 45284 - 47626 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas bentonitica_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.