Cluster: Rep_806_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_806
- CGC Family ID: CGCFAM_05668
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_806_c_22 | Rep_806_c_22_22 | 22138 | 23622 | - | 2.A.66.1.25 |
| NULL(UNKNOWN) | Rep_806_c_22 | Rep_806_c_22_23 | 23687 | 24028 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_806_c_22 | Rep_806_c_22_24 | 24021 | 24425 | + | S4 |
| CAZyme | Rep_806_c_22 | Rep_806_c_22_25 | 24495 | 26729 | - | AA2 |
Gene ID: Rep_806_c_22_22
Type: TC
Location: 22138 - 23622 (-)
Type: TC
Location: 22138 - 23622 (-)
Gene ID: Rep_806_c_22_23
Type:
Location: 23687 - 24028 (+)
Type:
Location: 23687 - 24028 (+)
Gene ID: Rep_806_c_22_24
Type: pfam
Location: 24021 - 24425 (+)
Type: pfam
Location: 24021 - 24425 (+)
Gene ID: Rep_806_c_22_25
Type: CAZyme
Location: 24495 - 26729 (-)
Type: CAZyme
Location: 24495 - 26729 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas bentonitica_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.