Cluster: Rep_806_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_806
- CGC Family ID: CGCFAM_08740
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_806_c_1 | Rep_806_c_1_118 | 128070 | 129650 | - | CBM91 | GH43_9 |
| CAZyme | Rep_806_c_1 | Rep_806_c_1_119 | 129689 | 130846 | - | PL10_1 |
| TC | Rep_806_c_1 | Rep_806_c_1_120 | 130819 | 132102 | - | 2.A.56.1.5 |
Gene ID: Rep_806_c_1_118
Type: CAZyme
Location: 128070 - 129650 (-)
Type: CAZyme
Location: 128070 - 129650 (-)
Gene ID: Rep_806_c_1_119
Type: CAZyme
Location: 129689 - 130846 (-)
Type: CAZyme
Location: 129689 - 130846 (-)
Gene ID: Rep_806_c_1_120
Type: TC
Location: 130819 - 132102 (-)
Type: TC
Location: 130819 - 132102 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas bentonitica_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.