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Cluster: Rep_806_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_806_c_15 Rep_806_c_15_40 42538 43839 - 2.A.11.1.2
TF Rep_806_c_15 Rep_806_c_15_41 43951 44601 + GerE
TC Rep_806_c_15 Rep_806_c_15_42 44598 47261 - 2.A.21.9.2
pfam Rep_806_c_15 Rep_806_c_15_43 47318 48484 - Porin_O_P
TC Rep_806_c_15 Rep_806_c_15_44 48749 50098 + 2.A.23.1.3
pfam Rep_806_c_15 Rep_806_c_15_45 50298 52592 + malic | PTA_PTB | Malic_M
pfam Rep_806_c_15 Rep_806_c_15_46 53019 53705 - BSP
CAZyme Rep_806_c_15 Rep_806_c_15_47 53714 57070 - GH92
pfam Rep_806_c_15 Rep_806_c_15_48 57457 57654 + zf-CHCC
CAZyme Rep_806_c_15 Rep_806_c_15_49 57670 58782 + GT4
pfam Rep_806_c_15 Rep_806_c_15_50 58793 60085 + Wzy_C
pfam Rep_806_c_15 Rep_806_c_15_51 60740 61660 - Lip_A_acyltrans
CAZyme Rep_806_c_15 Rep_806_c_15_52 61687 63054 + GT30
TC Rep_806_c_15 Rep_806_c_15_53 63112 64494 - 1.A.26.1.2
NULL(UNKNOWN) Rep_806_c_15 Rep_806_c_15_54 64670 65338 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_806_c_15 Rep_806_c_15_55 65797 67158 - 2.A.6.2.27
pfam Rep_806_c_15 Rep_806_c_15_56 67175 67822 - RrnaAD | PCMT | CMAS | Methyltransf_11 | Methyltransf_25
STP Rep_806_c_15 Rep_806_c_15_57 67954 68619 - TetR_N
TC Rep_806_c_15 Rep_806_c_15_58 68741 69886 + 2.A.6.2.27
TC Rep_806_c_15 Rep_806_c_15_59 69891 73064 + 2.A.6.2.17
Gene ID: Rep_806_c_15_40
Type: TC
Location: 42538 - 43839 (-)
Gene ID: Rep_806_c_15_41
Type: TF
Location: 43951 - 44601 (+)
Gene ID: Rep_806_c_15_42
Type: TC
Location: 44598 - 47261 (-)
Gene ID: Rep_806_c_15_43
Type: pfam
Location: 47318 - 48484 (-)
Gene ID: Rep_806_c_15_44
Type: TC
Location: 48749 - 50098 (+)
Gene ID: Rep_806_c_15_45
Type: pfam
Location: 50298 - 52592 (+)
Gene ID: Rep_806_c_15_46
Type: pfam
Location: 53019 - 53705 (-)
Gene ID: Rep_806_c_15_47
Type: CAZyme
Location: 53714 - 57070 (-)
Gene ID: Rep_806_c_15_48
Type: pfam
Location: 57457 - 57654 (+)
Gene ID: Rep_806_c_15_49
Type: CAZyme
Location: 57670 - 58782 (+)
Gene ID: Rep_806_c_15_50
Type: pfam
Location: 58793 - 60085 (+)
Gene ID: Rep_806_c_15_51
Type: pfam
Location: 60740 - 61660 (-)
Gene ID: Rep_806_c_15_52
Type: CAZyme
Location: 61687 - 63054 (+)
Gene ID: Rep_806_c_15_53
Type: TC
Location: 63112 - 64494 (-)
Gene ID: Rep_806_c_15_54
Type:
Location: 64670 - 65338 (-)
Gene ID: Rep_806_c_15_55
Type: TC
Location: 65797 - 67158 (-)
Gene ID: Rep_806_c_15_56
Type: pfam
Location: 67175 - 67822 (-)
Gene ID: Rep_806_c_15_57
Type: STP
Location: 67954 - 68619 (-)
Gene ID: Rep_806_c_15_58
Type: TC
Location: 68741 - 69886 (+)
Gene ID: Rep_806_c_15_59
Type: TC
Location: 69891 - 73064 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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