Cluster: Rep_806_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_806
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_806_c_12 | Rep_806_c_12_72 | 70019 | 71443 | - | 2.A.73.1.1 |
| pfam | Rep_806_c_12 | Rep_806_c_12_73 | 71566 | 72459 | - | UbiA |
| CAZyme | Rep_806_c_12 | Rep_806_c_12_74 | 72839 | 74194 | - | GH109 |
| TC | Rep_806_c_12 | Rep_806_c_12_75 | 74248 | 77220 | - | 1.B.14.6.11 |
| CAZyme | Rep_806_c_12 | Rep_806_c_12_76 | 77359 | 80718 | - | CBM51 | GH31_18 |
Gene ID: Rep_806_c_12_72
Type: TC
Location: 70019 - 71443 (-)
Type: TC
Location: 70019 - 71443 (-)
Gene ID: Rep_806_c_12_73
Type: pfam
Location: 71566 - 72459 (-)
Type: pfam
Location: 71566 - 72459 (-)
Gene ID: Rep_806_c_12_74
Type: CAZyme
Location: 72839 - 74194 (-)
Type: CAZyme
Location: 72839 - 74194 (-)
Gene ID: Rep_806_c_12_75
Type: TC
Location: 74248 - 77220 (-)
Type: TC
Location: 74248 - 77220 (-)
Gene ID: Rep_806_c_12_76
Type: CAZyme
Location: 77359 - 80718 (-)
Type: CAZyme
Location: 77359 - 80718 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas bentonitica_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.