Cluster: Rep_806_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_806
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_806_c_11 | Rep_806_c_11_20 | 20594 | 23776 | - | CBM32 |
| TC | Rep_806_c_11 | Rep_806_c_11_21 | 23773 | 24609 | - | 3.A.1.1.23 |
| TC | Rep_806_c_11 | Rep_806_c_11_22 | 24606 | 25487 | - | 3.A.1.1.20 |
| TC | Rep_806_c_11 | Rep_806_c_11_23 | 25484 | 26830 | - | 3.A.1.1.41 |
| CAZyme | Rep_806_c_11 | Rep_806_c_11_24 | 26834 | 28447 | - | GH144 |
Gene ID: Rep_806_c_11_20
Type: CAZyme
Location: 20594 - 23776 (-)
Type: CAZyme
Location: 20594 - 23776 (-)
Gene ID: Rep_806_c_11_21
Type: TC
Location: 23773 - 24609 (-)
Type: TC
Location: 23773 - 24609 (-)
Gene ID: Rep_806_c_11_22
Type: TC
Location: 24606 - 25487 (-)
Type: TC
Location: 24606 - 25487 (-)
Gene ID: Rep_806_c_11_23
Type: TC
Location: 25484 - 26830 (-)
Type: TC
Location: 25484 - 26830 (-)
Gene ID: Rep_806_c_11_24
Type: CAZyme
Location: 26834 - 28447 (-)
Type: CAZyme
Location: 26834 - 28447 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas bentonitica_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.