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Cluster: Rep_806_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_806_c_10 Rep_806_c_10_63 70122 71072 - 3.A.1.140.1
TC Rep_806_c_10 Rep_806_c_10_64 71069 71845 - 3.A.1.140.1
TC Rep_806_c_10 Rep_806_c_10_65 71980 73692 - 1.I.1.1.3
pfam Rep_806_c_10 Rep_806_c_10_66 74253 74582 + Thioredoxin | AhpC-TSA | Thioredoxin_2
TC Rep_806_c_10 Rep_806_c_10_67 74805 76631 + 3.A.6.1.1
CAZyme Rep_806_c_10 Rep_806_c_10_68 76762 79293 - GH3
TF Rep_806_c_10 Rep_806_c_10_69 79540 80643 + LacI
TC Rep_806_c_10 Rep_806_c_10_70 80653 81930 - 2.A.1.7.10
TC Rep_806_c_10 Rep_806_c_10_71 82352 85363 + 1.B.14.12.2
pfam Rep_806_c_10 Rep_806_c_10_72 85475 86491 + Cupin_8
TC Rep_806_c_10 Rep_806_c_10_73 86708 88294 + 9.B.34.1.2
Gene ID: Rep_806_c_10_63
Type: TC
Location: 70122 - 71072 (-)
Gene ID: Rep_806_c_10_64
Type: TC
Location: 71069 - 71845 (-)
Gene ID: Rep_806_c_10_65
Type: TC
Location: 71980 - 73692 (-)
Gene ID: Rep_806_c_10_66
Type: pfam
Location: 74253 - 74582 (+)
Gene ID: Rep_806_c_10_67
Type: TC
Location: 74805 - 76631 (+)
Gene ID: Rep_806_c_10_68
Type: CAZyme
Location: 76762 - 79293 (-)
Gene ID: Rep_806_c_10_69
Type: TF
Location: 79540 - 80643 (+)
Gene ID: Rep_806_c_10_70
Type: TC
Location: 80653 - 81930 (-)
Gene ID: Rep_806_c_10_71
Type: TC
Location: 82352 - 85363 (+)
Gene ID: Rep_806_c_10_72
Type: pfam
Location: 85475 - 86491 (+)
Gene ID: Rep_806_c_10_73
Type: TC
Location: 86708 - 88294 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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