Cluster: Rep_806_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_806
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_806_c_1 | Rep_806_c_1_41 | 41809 | 42987 | - | GH102 |
| pfam | Rep_806_c_1 | Rep_806_c_1_42 | 42984 | 43733 | - | Amidase_2 |
| TC | Rep_806_c_1 | Rep_806_c_1_43 | 43874 | 45307 | - | 1.A.11.1.1 |
Gene ID: Rep_806_c_1_41
Type: CAZyme
Location: 41809 - 42987 (-)
Type: CAZyme
Location: 41809 - 42987 (-)
Gene ID: Rep_806_c_1_42
Type: pfam
Location: 42984 - 43733 (-)
Type: pfam
Location: 42984 - 43733 (-)
Gene ID: Rep_806_c_1_43
Type: TC
Location: 43874 - 45307 (-)
Type: TC
Location: 43874 - 45307 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Stenotrophomonas
Species
Stenotrophomonas bentonitica_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.