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Cluster: Rep_802_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_802_c_4 Rep_802_c_4_233 235299 236153 + 1.A.1.24.3
pfam Rep_802_c_4 Rep_802_c_4_234 236302 236715 + UPF0093
pfam Rep_802_c_4 Rep_802_c_4_235 236766 237230 - DUF2231
TC Rep_802_c_4 Rep_802_c_4_236 237378 238271 + 3.D.4.7.1
TC Rep_802_c_4 Rep_802_c_4_237 238268 240781 + 3.D.4.4.1
NULL(UNKNOWN) Rep_802_c_4 Rep_802_c_4_238 240781 241143 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_802_c_4 Rep_802_c_4_239 241140 241961 + Caa3_CtaG
TC Rep_802_c_4 Rep_802_c_4_240 242125 243573 + 2.A.47.1.12
pfam Rep_802_c_4 Rep_802_c_4_241 243719 244330 - EFP | EFP_N | Elong-fact-P_C
CAZyme Rep_802_c_4 Rep_802_c_4_242 244327 245478 - GT104
NULL(UNKNOWN) Rep_802_c_4 Rep_802_c_4_243 245478 245612 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_802_c_4 Rep_802_c_4_244 245870 247882 - 9.B.18.2.1
TC Rep_802_c_4 Rep_802_c_4_245 247988 248998 - 9.B.146.1.1
pfam Rep_802_c_4 Rep_802_c_4_246 248995 249990 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NmrA | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
CAZyme Rep_802_c_4 Rep_802_c_4_247 249962 251071 - GT4
CAZyme Rep_802_c_4 Rep_802_c_4_248 251068 252213 - GT4
Gene ID: Rep_802_c_4_233
Type: TC
Location: 235299 - 236153 (+)
Gene ID: Rep_802_c_4_234
Type: pfam
Location: 236302 - 236715 (+)
Gene ID: Rep_802_c_4_235
Type: pfam
Location: 236766 - 237230 (-)
Gene ID: Rep_802_c_4_236
Type: TC
Location: 237378 - 238271 (+)
Gene ID: Rep_802_c_4_237
Type: TC
Location: 238268 - 240781 (+)
Gene ID: Rep_802_c_4_238
Type:
Location: 240781 - 241143 (+)
Gene ID: Rep_802_c_4_239
Type: pfam
Location: 241140 - 241961 (+)
Gene ID: Rep_802_c_4_240
Type: TC
Location: 242125 - 243573 (+)
Gene ID: Rep_802_c_4_241
Type: pfam
Location: 243719 - 244330 (-)
Gene ID: Rep_802_c_4_242
Type: CAZyme
Location: 244327 - 245478 (-)
Gene ID: Rep_802_c_4_243
Type:
Location: 245478 - 245612 (-)
Gene ID: Rep_802_c_4_244
Type: TC
Location: 245870 - 247882 (-)
Gene ID: Rep_802_c_4_245
Type: TC
Location: 247988 - 248998 (-)
Gene ID: Rep_802_c_4_246
Type: pfam
Location: 248995 - 249990 (-)
Gene ID: Rep_802_c_4_247
Type: CAZyme
Location: 249962 - 251071 (-)
Gene ID: Rep_802_c_4_248
Type: CAZyme
Location: 251068 - 252213 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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