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Cluster: Rep_802_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_802_c_14 Rep_802_c_14_4 3084 4904 - GH15
sulfatase Rep_802_c_14 Rep_802_c_14_5 4897 5700 - S1_6
STP Rep_802_c_14 Rep_802_c_14_6 6112 8397 + HATPase_c | HisKA | MHYT | MHYT | MHYT | PAS | Response_reg
TC Rep_802_c_14 Rep_802_c_14_7 8599 10986 + 2.A.21.9.2
pfam Rep_802_c_14 Rep_802_c_14_8 11086 11649 - Flavodoxin_2 | FMN_red
TC Rep_802_c_14 Rep_802_c_14_9 12757 14154 + 1.B.25.1.19
pfam Rep_802_c_14 Rep_802_c_14_10 14406 15689 + LIP
STP Rep_802_c_14 Rep_802_c_14_11 15743 16951 - Citrate_synt
TC Rep_802_c_14 Rep_802_c_14_12 17086 17868 + 9.B.99.1.2
TC Rep_802_c_14 Rep_802_c_14_13 18006 18710 + 2.A.11.1.2
TC Rep_802_c_14 Rep_802_c_14_14 18653 19288 + 2.A.11.1.2
Gene ID: Rep_802_c_14_4
Type: CAZyme
Location: 3084 - 4904 (-)
Gene ID: Rep_802_c_14_5
Type: sulfatase
Location: 4897 - 5700 (-)
Gene ID: Rep_802_c_14_6
Type: STP
Location: 6112 - 8397 (+)
Gene ID: Rep_802_c_14_7
Type: TC
Location: 8599 - 10986 (+)
Gene ID: Rep_802_c_14_8
Type: pfam
Location: 11086 - 11649 (-)
Gene ID: Rep_802_c_14_9
Type: TC
Location: 12757 - 14154 (+)
Gene ID: Rep_802_c_14_10
Type: pfam
Location: 14406 - 15689 (+)
Gene ID: Rep_802_c_14_11
Type: STP
Location: 15743 - 16951 (-)
Gene ID: Rep_802_c_14_12
Type: TC
Location: 17086 - 17868 (+)
Gene ID: Rep_802_c_14_13
Type: TC
Location: 18006 - 18710 (+)
Gene ID: Rep_802_c_14_14
Type: TC
Location: 18653 - 19288 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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