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Cluster: Rep_802_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_802_c_12 Rep_802_c_12_286 291931 293178 - CBM50
pfam Rep_802_c_12 Rep_802_c_12_287 293183 294037 - DUF4123
TC Rep_802_c_12 Rep_802_c_12_288 294010 296106 - 3.A.23.1.1
TF Rep_802_c_12 Rep_802_c_12_289 296122 297654 - HTH_8
TC Rep_802_c_12 Rep_802_c_12_290 297641 300241 - 3.A.23.2.1
pfam Rep_802_c_12 Rep_802_c_12_291 300252 301289 - T6SS_TssG
TC Rep_802_c_12 Rep_802_c_12_292 301366 303156 - 3.A.23.1.1
pfam Rep_802_c_12 Rep_802_c_12_293 303185 303460 - PAAR_motif
pfam Rep_802_c_12 Rep_802_c_12_294 303471 303875 - GPW_gp25
TC Rep_802_c_12 Rep_802_c_12_295 303882 305360 - 3.A.23.2.1
Gene ID: Rep_802_c_12_286
Type: CAZyme
Location: 291931 - 293178 (-)
Gene ID: Rep_802_c_12_287
Type: pfam
Location: 293183 - 294037 (-)
Gene ID: Rep_802_c_12_288
Type: TC
Location: 294010 - 296106 (-)
Gene ID: Rep_802_c_12_289
Type: TF
Location: 296122 - 297654 (-)
Gene ID: Rep_802_c_12_290
Type: TC
Location: 297641 - 300241 (-)
Gene ID: Rep_802_c_12_291
Type: pfam
Location: 300252 - 301289 (-)
Gene ID: Rep_802_c_12_292
Type: TC
Location: 301366 - 303156 (-)
Gene ID: Rep_802_c_12_293
Type: pfam
Location: 303185 - 303460 (-)
Gene ID: Rep_802_c_12_294
Type: pfam
Location: 303471 - 303875 (-)
Gene ID: Rep_802_c_12_295
Type: TC
Location: 303882 - 305360 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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