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Cluster: Rep_802_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_802_c_8 Rep_802_c_8_118 124157 125149 + 4.D.2.4.3
CAZyme Rep_802_c_8 Rep_802_c_8_119 125385 127601 - CBM48 | GH13_9
CAZyme Rep_802_c_8 Rep_802_c_8_120 127598 130930 - GH13_16
CAZyme Rep_802_c_8 Rep_802_c_8_121 131078 133090 - GH13_3
NULL(UNKNOWN) Rep_802_c_8 Rep_802_c_8_122 133386 133550 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_802_c_8 Rep_802_c_8_123 133746 134684 - FdhE_N | FdhE_central | FdhE_C
TC Rep_802_c_8 Rep_802_c_8_124 134681 135373 - 5.A.3.2.1
TC Rep_802_c_8 Rep_802_c_8_125 135370 136305 - 5.A.3.2.1
TC Rep_802_c_8 Rep_802_c_8_126 136305 138740 - 5.A.3.2.1
TC Rep_802_c_8 Rep_802_c_8_127 138789 139382 - 5.A.3.2.1
Gene ID: Rep_802_c_8_118
Type: TC
Location: 124157 - 125149 (+)
Gene ID: Rep_802_c_8_119
Type: CAZyme
Location: 125385 - 127601 (-)
Gene ID: Rep_802_c_8_120
Type: CAZyme
Location: 127598 - 130930 (-)
Gene ID: Rep_802_c_8_121
Type: CAZyme
Location: 131078 - 133090 (-)
Gene ID: Rep_802_c_8_122
Type:
Location: 133386 - 133550 (+)
Gene ID: Rep_802_c_8_123
Type: pfam
Location: 133746 - 134684 (-)
Gene ID: Rep_802_c_8_124
Type: TC
Location: 134681 - 135373 (-)
Gene ID: Rep_802_c_8_125
Type: TC
Location: 135370 - 136305 (-)
Gene ID: Rep_802_c_8_126
Type: TC
Location: 136305 - 138740 (-)
Gene ID: Rep_802_c_8_127
Type: TC
Location: 138789 - 139382 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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