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Cluster: Rep_802_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_802_c_8 Rep_802_c_8_102 103720 104832 + 1.A.23.7.1
pfam Rep_802_c_8 Rep_802_c_8_103 104829 105338 - CinA
CAZyme Rep_802_c_8 Rep_802_c_8_104 105639 107189 + GT5
CAZyme Rep_802_c_8 Rep_802_c_8_105 107200 108975 + GH13_10
CAZyme Rep_802_c_8 Rep_802_c_8_106 108968 111046 + GH77
CAZyme Rep_802_c_8 Rep_802_c_8_107 111043 113835 + GH13_26
pfam Rep_802_c_8 Rep_802_c_8_108 113850 114179 + DUF2934
CAZyme Rep_802_c_8 Rep_802_c_8_109 114246 116396 + CBM48 | GH13_11
TC Rep_802_c_8 Rep_802_c_8_110 116576 117412 + 1.A.34.1.3
Gene ID: Rep_802_c_8_102
Type: TC
Location: 103720 - 104832 (+)
Gene ID: Rep_802_c_8_103
Type: pfam
Location: 104829 - 105338 (-)
Gene ID: Rep_802_c_8_104
Type: CAZyme
Location: 105639 - 107189 (+)
Gene ID: Rep_802_c_8_105
Type: CAZyme
Location: 107200 - 108975 (+)
Gene ID: Rep_802_c_8_106
Type: CAZyme
Location: 108968 - 111046 (+)
Gene ID: Rep_802_c_8_107
Type: CAZyme
Location: 111043 - 113835 (+)
Gene ID: Rep_802_c_8_108
Type: pfam
Location: 113850 - 114179 (+)
Gene ID: Rep_802_c_8_109
Type: CAZyme
Location: 114246 - 116396 (+)
Gene ID: Rep_802_c_8_110
Type: TC
Location: 116576 - 117412 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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