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Cluster: Rep_800_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_800_c_10 Rep_800_c_10_30 33238 36093 - 9.B.34.1.1
pfam Rep_800_c_10 Rep_800_c_10_31 36270 38456 + UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor
TC Rep_800_c_10 Rep_800_c_10_32 38494 38922 + 2.A.7.2.1
pfam Rep_800_c_10 Rep_800_c_10_33 39020 40513 + AcetylCoA_hydro | CitF | AcetylCoA_hyd_C
pfam Rep_800_c_10 Rep_800_c_10_34 40891 41094 + DUF1127
CAZyme Rep_800_c_10 Rep_800_c_10_35 41150 42295 - GT4
CAZyme Rep_800_c_10 Rep_800_c_10_36 42296 43423 - GT4
CAZyme Rep_800_c_10 Rep_800_c_10_37 43407 44789 - GT4
TC Rep_800_c_10 Rep_800_c_10_38 44786 46051 - 3.A.1.103.6
TC Rep_800_c_10 Rep_800_c_10_39 46051 46848 - 3.A.1.103.6
Gene ID: Rep_800_c_10_30
Type: TC
Location: 33238 - 36093 (-)
Gene ID: Rep_800_c_10_31
Type: pfam
Location: 36270 - 38456 (+)
Gene ID: Rep_800_c_10_32
Type: TC
Location: 38494 - 38922 (+)
Gene ID: Rep_800_c_10_33
Type: pfam
Location: 39020 - 40513 (+)
Gene ID: Rep_800_c_10_34
Type: pfam
Location: 40891 - 41094 (+)
Gene ID: Rep_800_c_10_35
Type: CAZyme
Location: 41150 - 42295 (-)
Gene ID: Rep_800_c_10_36
Type: CAZyme
Location: 42296 - 43423 (-)
Gene ID: Rep_800_c_10_37
Type: CAZyme
Location: 43407 - 44789 (-)
Gene ID: Rep_800_c_10_38
Type: TC
Location: 44786 - 46051 (-)
Gene ID: Rep_800_c_10_39
Type: TC
Location: 46051 - 46848 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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