Cluster: Rep_800_CGC32
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_800
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_800_c_40 | Rep_800_c_40_282 | 289798 | 290529 | + | GT51 |
| NULL(UNKNOWN) | Rep_800_c_40 | Rep_800_c_40_283 | 290534 | 291139 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | Rep_800_c_40 | Rep_800_c_40_284 | 291204 | 292058 | - | Sigma70_r2 | Sigma70_r4 |
| TC | Rep_800_c_40 | Rep_800_c_40_285 | 292172 | 293179 | - | 3.A.1.140.1 |
| TC | Rep_800_c_40 | Rep_800_c_40_286 | 293179 | 293850 | - | 3.A.1.140.1 |
| TC | Rep_800_c_40 | Rep_800_c_40_287 | 293847 | 295208 | - | 3.A.5.1.1 |
Gene ID: Rep_800_c_40_282
Type: CAZyme
Location: 289798 - 290529 (+)
Type: CAZyme
Location: 289798 - 290529 (+)
Gene ID: Rep_800_c_40_283
Type:
Location: 290534 - 291139 (-)
Type:
Location: 290534 - 291139 (-)
Gene ID: Rep_800_c_40_284
Type: STP
Location: 291204 - 292058 (-)
Type: STP
Location: 291204 - 292058 (-)
Gene ID: Rep_800_c_40_285
Type: TC
Location: 292172 - 293179 (-)
Type: TC
Location: 292172 - 293179 (-)
Gene ID: Rep_800_c_40_286
Type: TC
Location: 293179 - 293850 (-)
Type: TC
Location: 293179 - 293850 (-)
Gene ID: Rep_800_c_40_287
Type: TC
Location: 293847 - 295208 (-)
Type: TC
Location: 293847 - 295208 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Species
Pseudomonas aeruginosa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.