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Cluster: Rep_800_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_800_c_37 Rep_800_c_37_337 391789 394500 + 3.A.3.4.1
NULL(UNKNOWN) Rep_800_c_37 Rep_800_c_37_338 394598 395374 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_800_c_37 Rep_800_c_37_339 395425 395634 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_800_c_37 Rep_800_c_37_340 395677 397344 + 2.A.58.2.1
pfam Rep_800_c_37 Rep_800_c_37_341 397332 397700 + YAcAr
TC Rep_800_c_37 Rep_800_c_37_342 397676 399037 - 2.A.66.1.4
pfam Rep_800_c_37 Rep_800_c_37_343 399274 399636 + GtrA_DPMS_TM
CAZyme Rep_800_c_37 Rep_800_c_37_344 399633 400607 + GT2
CAZyme Rep_800_c_37 Rep_800_c_37_345 400604 402040 + GT83
Gene ID: Rep_800_c_37_337
Type: TC
Location: 391789 - 394500 (+)
Gene ID: Rep_800_c_37_338
Type:
Location: 394598 - 395374 (+)
Gene ID: Rep_800_c_37_339
Type:
Location: 395425 - 395634 (+)
Gene ID: Rep_800_c_37_340
Type: TC
Location: 395677 - 397344 (+)
Gene ID: Rep_800_c_37_341
Type: pfam
Location: 397332 - 397700 (+)
Gene ID: Rep_800_c_37_342
Type: TC
Location: 397676 - 399037 (-)
Gene ID: Rep_800_c_37_343
Type: pfam
Location: 399274 - 399636 (+)
Gene ID: Rep_800_c_37_344
Type: CAZyme
Location: 399633 - 400607 (+)
Gene ID: Rep_800_c_37_345
Type: CAZyme
Location: 400604 - 402040 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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