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Cluster: Rep_800_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_800_c_30 Rep_800_c_30_1 2 1357 - 1.B.19.1.1
pfam Rep_800_c_30 Rep_800_c_30_2 1699 1980 - GBBH-like_N
STP Rep_800_c_30 Rep_800_c_30_3 1977 2942 - HEAT_PBS
TC Rep_800_c_30 Rep_800_c_30_4 2939 3793 - 3.A.1.17.4
TC Rep_800_c_30 Rep_800_c_30_5 3790 4587 - 3.A.1.17.2
TC Rep_800_c_30 Rep_800_c_30_6 4612 6018 - 3.A.1.17.2
pfam Rep_800_c_30 Rep_800_c_30_7 6153 6398 - Fer4_6 | Fer4_7 | Fer4_9 | Fer4_10
TC Rep_800_c_30 Rep_800_c_30_8 6484 8208 - 3.D.10.1.4
TF Rep_800_c_30 Rep_800_c_30_9 8205 8954 - GntR
CAZyme Rep_800_c_30 Rep_800_c_30_10 9131 10582 - GH18
Gene ID: Rep_800_c_30_1
Type: TC
Location: 2 - 1357 (-)
Gene ID: Rep_800_c_30_2
Type: pfam
Location: 1699 - 1980 (-)
Gene ID: Rep_800_c_30_3
Type: STP
Location: 1977 - 2942 (-)
Gene ID: Rep_800_c_30_4
Type: TC
Location: 2939 - 3793 (-)
Gene ID: Rep_800_c_30_5
Type: TC
Location: 3790 - 4587 (-)
Gene ID: Rep_800_c_30_6
Type: TC
Location: 4612 - 6018 (-)
Gene ID: Rep_800_c_30_7
Type: pfam
Location: 6153 - 6398 (-)
Gene ID: Rep_800_c_30_8
Type: TC
Location: 6484 - 8208 (-)
Gene ID: Rep_800_c_30_9
Type: TF
Location: 8205 - 8954 (-)
Gene ID: Rep_800_c_30_10
Type: CAZyme
Location: 9131 - 10582 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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