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Cluster: Rep_800_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_800_c_1 Rep_800_c_1_155 166975 168819 + AA1
TC Rep_800_c_1 Rep_800_c_1_156 168816 169871 + 1.B.76.1.6
pfam Rep_800_c_1 Rep_800_c_1_157 169891 171114 - T6SS_Tle1-like_cat
pfam Rep_800_c_1 Rep_800_c_1_158 171317 172498 - Aminotran_5
TC Rep_800_c_1 Rep_800_c_1_159 172644 174254 - 3.A.1.5.21
TC Rep_800_c_1 Rep_800_c_1_160 174256 175272 - 3.A.1.5.21
TC Rep_800_c_1 Rep_800_c_1_161 175274 176347 - 3.A.1.5.21
TC Rep_800_c_1 Rep_800_c_1_162 176349 178157 - 3.A.1.5.24
TC Rep_800_c_1 Rep_800_c_1_163 178161 181118 - 1.B.14.6.11
TF Rep_800_c_1 Rep_800_c_1_164 181380 182282 - HTH_1
TC Rep_800_c_1 Rep_800_c_1_165 182393 183808 + 2.A.1.3.11
TF Rep_800_c_1 Rep_800_c_1_166 183815 184702 - HTH_1
TC Rep_800_c_1 Rep_800_c_1_167 184817 185479 + 2.A.53.3.12
Gene ID: Rep_800_c_1_155
Type: CAZyme
Location: 166975 - 168819 (+)
Gene ID: Rep_800_c_1_156
Type: TC
Location: 168816 - 169871 (+)
Gene ID: Rep_800_c_1_157
Type: pfam
Location: 169891 - 171114 (-)
Gene ID: Rep_800_c_1_158
Type: pfam
Location: 171317 - 172498 (-)
Gene ID: Rep_800_c_1_159
Type: TC
Location: 172644 - 174254 (-)
Gene ID: Rep_800_c_1_160
Type: TC
Location: 174256 - 175272 (-)
Gene ID: Rep_800_c_1_161
Type: TC
Location: 175274 - 176347 (-)
Gene ID: Rep_800_c_1_162
Type: TC
Location: 176349 - 178157 (-)
Gene ID: Rep_800_c_1_163
Type: TC
Location: 178161 - 181118 (-)
Gene ID: Rep_800_c_1_164
Type: TF
Location: 181380 - 182282 (-)
Gene ID: Rep_800_c_1_165
Type: TC
Location: 182393 - 183808 (+)
Gene ID: Rep_800_c_1_166
Type: TF
Location: 183815 - 184702 (-)
Gene ID: Rep_800_c_1_167
Type: TC
Location: 184817 - 185479 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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