Cluster: Rep_784_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_784
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_784_c_56 | Rep_784_c_56_51 | 54105 | 55022 | - | 3.A.5.1.1 |
| pfam | Rep_784_c_56 | Rep_784_c_56_52 | 55015 | 56058 | - | UPF0004 | Radical_SAM |
| pfam | Rep_784_c_56 | Rep_784_c_56_53 | 56183 | 56977 | - | Glucosamine_iso |
| CAZyme | Rep_784_c_56 | Rep_784_c_56_54 | 56974 | 58134 | - | CE9 |
Gene ID: Rep_784_c_56_51
Type: TC
Location: 54105 - 55022 (-)
Type: TC
Location: 54105 - 55022 (-)
Gene ID: Rep_784_c_56_52
Type: pfam
Location: 55015 - 56058 (-)
Type: pfam
Location: 55015 - 56058 (-)
Gene ID: Rep_784_c_56_53
Type: pfam
Location: 56183 - 56977 (-)
Type: pfam
Location: 56183 - 56977 (-)
Gene ID: Rep_784_c_56_54
Type: CAZyme
Location: 56974 - 58134 (-)
Type: CAZyme
Location: 56974 - 58134 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp910577095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.