Cluster: Rep_784_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_784
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_784_c_8 | Rep_784_c_8_3 | 1594 | 4443 | + | 2.A.1.42.2 |
| NULL(UNKNOWN) | Rep_784_c_8 | Rep_784_c_8_4 | 4558 | 5244 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_784_c_8 | Rep_784_c_8_5 | 5378 | 6085 | + | Pirin | Pirin_C_2 |
| CAZyme | Rep_784_c_8 | Rep_784_c_8_6 | 6089 | 6901 | - | GT2 |
Gene ID: Rep_784_c_8_3
Type: TC
Location: 1594 - 4443 (+)
Type: TC
Location: 1594 - 4443 (+)
Gene ID: Rep_784_c_8_4
Type:
Location: 4558 - 5244 (+)
Type:
Location: 4558 - 5244 (+)
Gene ID: Rep_784_c_8_5
Type: pfam
Location: 5378 - 6085 (+)
Type: pfam
Location: 5378 - 6085 (+)
Gene ID: Rep_784_c_8_6
Type: CAZyme
Location: 6089 - 6901 (-)
Type: CAZyme
Location: 6089 - 6901 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp910577095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.