Cluster: Rep_784_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_784
- CGC Family ID: CGCFAM_00382
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_784_c_2 | Rep_784_c_2_5 | 3580 | 5577 | + | GT111 | GT8 |
| CAZyme | Rep_784_c_2 | Rep_784_c_2_6 | 5644 | 6705 | + | GT2 |
| TC | Rep_784_c_2 | Rep_784_c_2_7 | 6711 | 8111 | - | 8.A.1.3.1 |
| TC | Rep_784_c_2 | Rep_784_c_2_8 | 8116 | 10269 | - | 3.A.1.109.1 |
Gene ID: Rep_784_c_2_5
Type: CAZyme
Location: 3580 - 5577 (+)
Type: CAZyme
Location: 3580 - 5577 (+)
Gene ID: Rep_784_c_2_6
Type: CAZyme
Location: 5644 - 6705 (+)
Type: CAZyme
Location: 5644 - 6705 (+)
Gene ID: Rep_784_c_2_7
Type: TC
Location: 6711 - 8111 (-)
Type: TC
Location: 6711 - 8111 (-)
Gene ID: Rep_784_c_2_8
Type: TC
Location: 8116 - 10269 (-)
Type: TC
Location: 8116 - 10269 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp910577095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.