Cluster: Rep_784_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_784
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_784_c_1 | Rep_784_c_1_49 | 49302 | 50474 | + | GT19 |
| pfam | Rep_784_c_1 | Rep_784_c_1_50 | 50560 | 51099 | - | bPH_2 |
| TC | Rep_784_c_1 | Rep_784_c_1_51 | 51101 | 52546 | - | 2.A.38.1.2 |
Gene ID: Rep_784_c_1_49
Type: CAZyme
Location: 49302 - 50474 (+)
Type: CAZyme
Location: 49302 - 50474 (+)
Gene ID: Rep_784_c_1_50
Type: pfam
Location: 50560 - 51099 (-)
Type: pfam
Location: 50560 - 51099 (-)
Gene ID: Rep_784_c_1_51
Type: TC
Location: 51101 - 52546 (-)
Type: TC
Location: 51101 - 52546 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp910577095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.