Cluster: Rep_784_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_784
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_784_c_1 | Rep_784_c_1_30 | 30501 | 31556 | + | 9.A.40.2.2 |
| pfam | Rep_784_c_1 | Rep_784_c_1_31 | 31628 | 32089 | + | CTP_transf_like |
| STP | Rep_784_c_1 | Rep_784_c_1_32 | 32162 | 34549 | - | Fer4 | Fer4 |
| CAZyme | Rep_784_c_1 | Rep_784_c_1_33 | 34542 | 35435 | - | GT2 |
| CAZyme | Rep_784_c_1 | Rep_784_c_1_34 | 35451 | 36410 | - | GT2 |
Gene ID: Rep_784_c_1_30
Type: TC
Location: 30501 - 31556 (+)
Type: TC
Location: 30501 - 31556 (+)
Gene ID: Rep_784_c_1_31
Type: pfam
Location: 31628 - 32089 (+)
Type: pfam
Location: 31628 - 32089 (+)
Gene ID: Rep_784_c_1_32
Type: STP
Location: 32162 - 34549 (-)
Type: STP
Location: 32162 - 34549 (-)
Gene ID: Rep_784_c_1_33
Type: CAZyme
Location: 34542 - 35435 (-)
Type: CAZyme
Location: 34542 - 35435 (-)
Gene ID: Rep_784_c_1_34
Type: CAZyme
Location: 35451 - 36410 (-)
Type: CAZyme
Location: 35451 - 36410 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
51-20
Species
51-20 sp910577095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.