Cluster: Rep_781_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_781
- CGC Family ID: CGCFAM_04502
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_781_c_30 | Rep_781_c_30_1 | 1 | 819 | + | 3.A.2.1.7 |
| pfam | Rep_781_c_30 | Rep_781_c_30_2 | 882 | 1259 | + | ATP-synt_DE_N |
| CAZyme | Rep_781_c_30 | Rep_781_c_30_3 | 1374 | 2504 | + | GT4 |
| CAZyme | Rep_781_c_30 | Rep_781_c_30_4 | 2507 | 3400 | - | GT2 |
| CAZyme | Rep_781_c_30 | Rep_781_c_30_5 | 3507 | 4385 | - | GT32 |
| CAZyme | Rep_781_c_30 | Rep_781_c_30_6 | 4394 | 5488 | - | GT2 |
Gene ID: Rep_781_c_30_1
Type: TC
Location: 1 - 819 (+)
Type: TC
Location: 1 - 819 (+)
Gene ID: Rep_781_c_30_2
Type: pfam
Location: 882 - 1259 (+)
Type: pfam
Location: 882 - 1259 (+)
Gene ID: Rep_781_c_30_3
Type: CAZyme
Location: 1374 - 2504 (+)
Type: CAZyme
Location: 1374 - 2504 (+)
Gene ID: Rep_781_c_30_4
Type: CAZyme
Location: 2507 - 3400 (-)
Type: CAZyme
Location: 2507 - 3400 (-)
Gene ID: Rep_781_c_30_5
Type: CAZyme
Location: 3507 - 4385 (-)
Type: CAZyme
Location: 3507 - 4385 (-)
Gene ID: Rep_781_c_30_6
Type: CAZyme
Location: 4394 - 5488 (-)
Type: CAZyme
Location: 4394 - 5488 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAJLXD01
Species
CAJLXD01 sp905210515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.