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Cluster: Rep_781_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_781_c_12 Rep_781_c_12_6 3984 5159 - CE9
pfam Rep_781_c_12 Rep_781_c_12_7 5305 6909 + Sulfatase | EptA_B_N
TC Rep_781_c_12 Rep_781_c_12_8 6935 8269 + 2.A.45.2.2
TC Rep_781_c_12 Rep_781_c_12_9 8430 9401 + 2.A.109.1.2
TC Rep_781_c_12 Rep_781_c_12_10 9434 10099 - 1.A.30.1.4
TC Rep_781_c_12 Rep_781_c_12_11 10100 10876 - 1.A.30.1.3
TC Rep_781_c_12 Rep_781_c_12_12 11041 12804 + 3.A.1.106.1
pfam Rep_781_c_12 Rep_781_c_12_13 12854 13228 - BOF
TC Rep_781_c_12 Rep_781_c_12_14 13301 13897 - 2.A.95.1.4
Gene ID: Rep_781_c_12_6
Type: CAZyme
Location: 3984 - 5159 (-)
Gene ID: Rep_781_c_12_7
Type: pfam
Location: 5305 - 6909 (+)
Gene ID: Rep_781_c_12_8
Type: TC
Location: 6935 - 8269 (+)
Gene ID: Rep_781_c_12_9
Type: TC
Location: 8430 - 9401 (+)
Gene ID: Rep_781_c_12_10
Type: TC
Location: 9434 - 10099 (-)
Gene ID: Rep_781_c_12_11
Type: TC
Location: 10100 - 10876 (-)
Gene ID: Rep_781_c_12_12
Type: TC
Location: 11041 - 12804 (+)
Gene ID: Rep_781_c_12_13
Type: pfam
Location: 12854 - 13228 (-)
Gene ID: Rep_781_c_12_14
Type: TC
Location: 13301 - 13897 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Pseudomonadota
→
Class
Alphaproteobacteria
→
Order
RF32
→
Family
CAG-239
→
Genus
CAJLXD01
→
Species
CAJLXD01 sp905210515

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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