Cluster: Rep_781_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_781
- CGC Family ID: CGCFAM_00472
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_781_c_69 | Rep_781_c_69_1 | 3 | 1304 | - | CBM48 | GH13_9 |
| pfam | Rep_781_c_69 | Rep_781_c_69_2 | 1579 | 1815 | + | DUF2934 |
| STP | Rep_781_c_69 | Rep_781_c_69_3 | 1865 | 3190 | - | TPR_1 |
| TC | Rep_781_c_69 | Rep_781_c_69_4 | 3352 | 4692 | + | 2.A.66.1.28 |
| pfam | Rep_781_c_69 | Rep_781_c_69_5 | 5044 | 6690 | + | Sulfatase |
| STP | Rep_781_c_69 | Rep_781_c_69_6 | 6788 | 7363 | + | TetR_N |
| CAZyme | Rep_781_c_69 | Rep_781_c_69_7 | 7411 | 8646 | + | GH13_20 |
Gene ID: Rep_781_c_69_1
Type: CAZyme
Location: 3 - 1304 (-)
Type: CAZyme
Location: 3 - 1304 (-)
Gene ID: Rep_781_c_69_2
Type: pfam
Location: 1579 - 1815 (+)
Type: pfam
Location: 1579 - 1815 (+)
Gene ID: Rep_781_c_69_3
Type: STP
Location: 1865 - 3190 (-)
Type: STP
Location: 1865 - 3190 (-)
Gene ID: Rep_781_c_69_4
Type: TC
Location: 3352 - 4692 (+)
Type: TC
Location: 3352 - 4692 (+)
Gene ID: Rep_781_c_69_5
Type: pfam
Location: 5044 - 6690 (+)
Type: pfam
Location: 5044 - 6690 (+)
Gene ID: Rep_781_c_69_6
Type: STP
Location: 6788 - 7363 (+)
Type: STP
Location: 6788 - 7363 (+)
Gene ID: Rep_781_c_69_7
Type: CAZyme
Location: 7411 - 8646 (+)
Type: CAZyme
Location: 7411 - 8646 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
CAJLXD01
Species
CAJLXD01 sp905210515
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.