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Cluster: Rep_77_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_77_c_12 Rep_77_c_12_107 147578 149260 - 8.A.46.2.1
TC Rep_77_c_12 Rep_77_c_12_108 149281 152454 - 1.B.14.6.2
CAZyme Rep_77_c_12 Rep_77_c_12_109 152923 155181 + GH92
TC Rep_77_c_12 Rep_77_c_12_110 155212 156435 + 2.A.1.7.1
peptidase Rep_77_c_12 Rep_77_c_12_111 156620 158650 - I39.UPW
TC Rep_77_c_12 Rep_77_c_12_112 158747 160201 - 2.A.21.3.7
CAZyme Rep_77_c_12 Rep_77_c_12_113 160421 161641 + CE1
Gene ID: Rep_77_c_12_107
Type: TC
Location: 147578 - 149260 (-)
Gene ID: Rep_77_c_12_108
Type: TC
Location: 149281 - 152454 (-)
Gene ID: Rep_77_c_12_109
Type: CAZyme
Location: 152923 - 155181 (+)
Gene ID: Rep_77_c_12_110
Type: TC
Location: 155212 - 156435 (+)
Gene ID: Rep_77_c_12_111
Type: peptidase
Location: 156620 - 158650 (-)
Gene ID: Rep_77_c_12_112
Type: TC
Location: 158747 - 160201 (-)
Gene ID: Rep_77_c_12_113
Type: CAZyme
Location: 160421 - 161641 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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