Cluster: Rep_77_CGC8
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 9
- Substrate:
- Genome ID: Rep_77
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_77_c_12 | Rep_77_c_12_70 | 96157 | 99273 | + | 1.B.14.6.1 |
| TC | Rep_77_c_12 | Rep_77_c_12_71 | 99311 | 101080 | + | 8.A.46.1.3 |
| NULL(UNKNOWN) | Rep_77_c_12 | Rep_77_c_12_72 | 101119 | 101475 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_77_c_12 | Rep_77_c_12_73 | 101643 | 103361 | + | GH32 |
| pfam | Rep_77_c_12 | Rep_77_c_12_74 | 103402 | 104121 | - | Lactamase_B |
| TF | Rep_77_c_12 | Rep_77_c_12_75 | 104423 | 105328 | + | HTH_AraC | HTH_AraC |
| CAZyme | Rep_77_c_12 | Rep_77_c_12_76 | 105596 | 107497 | + | GH35 |
| CAZyme | Rep_77_c_12 | Rep_77_c_12_77 | 107518 | 109863 | + | GH20 |
| CAZyme | Rep_77_c_12 | Rep_77_c_12_78 | 109900 | 111783 | + | GH29 |
| CAZyme | Rep_77_c_12 | Rep_77_c_12_79 | 111915 | 114269 | + | GH3 |
| CAZyme | Rep_77_c_12 | Rep_77_c_12_80 | 114266 | 116458 | + | GH92 |
| pfam | Rep_77_c_12 | Rep_77_c_12_81 | 116607 | 116882 | - | ParE_toxin | YoeB_toxin |
| NULL(UNKNOWN) | Rep_77_c_12 | Rep_77_c_12_82 | 116879 | 117136 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_77_c_12 | Rep_77_c_12_83 | 117392 | 118390 | - | GH130_2 |
| pfam | Rep_77_c_12 | Rep_77_c_12_84 | 118450 | 119718 | - | MFS_1 |
| CAZyme | Rep_77_c_12 | Rep_77_c_12_85 | 119919 | 121283 | + | GH29 |
| CAZyme | Rep_77_c_12 | Rep_77_c_12_86 | 121397 | 122506 | + | CBM9 |
Gene ID: Rep_77_c_12_70
Type: TC
Location: 96157 - 99273 (+)
Type: TC
Location: 96157 - 99273 (+)
Gene ID: Rep_77_c_12_71
Type: TC
Location: 99311 - 101080 (+)
Type: TC
Location: 99311 - 101080 (+)
Gene ID: Rep_77_c_12_72
Type:
Location: 101119 - 101475 (+)
Type:
Location: 101119 - 101475 (+)
Gene ID: Rep_77_c_12_73
Type: CAZyme
Location: 101643 - 103361 (+)
Type: CAZyme
Location: 101643 - 103361 (+)
Gene ID: Rep_77_c_12_74
Type: pfam
Location: 103402 - 104121 (-)
Type: pfam
Location: 103402 - 104121 (-)
Gene ID: Rep_77_c_12_75
Type: TF
Location: 104423 - 105328 (+)
Type: TF
Location: 104423 - 105328 (+)
Gene ID: Rep_77_c_12_76
Type: CAZyme
Location: 105596 - 107497 (+)
Type: CAZyme
Location: 105596 - 107497 (+)
Gene ID: Rep_77_c_12_77
Type: CAZyme
Location: 107518 - 109863 (+)
Type: CAZyme
Location: 107518 - 109863 (+)
Gene ID: Rep_77_c_12_78
Type: CAZyme
Location: 109900 - 111783 (+)
Type: CAZyme
Location: 109900 - 111783 (+)
Gene ID: Rep_77_c_12_79
Type: CAZyme
Location: 111915 - 114269 (+)
Type: CAZyme
Location: 111915 - 114269 (+)
Gene ID: Rep_77_c_12_80
Type: CAZyme
Location: 114266 - 116458 (+)
Type: CAZyme
Location: 114266 - 116458 (+)
Gene ID: Rep_77_c_12_81
Type: pfam
Location: 116607 - 116882 (-)
Type: pfam
Location: 116607 - 116882 (-)
Gene ID: Rep_77_c_12_82
Type:
Location: 116879 - 117136 (-)
Type:
Location: 116879 - 117136 (-)
Gene ID: Rep_77_c_12_83
Type: CAZyme
Location: 117392 - 118390 (-)
Type: CAZyme
Location: 117392 - 118390 (-)
Gene ID: Rep_77_c_12_84
Type: pfam
Location: 118450 - 119718 (-)
Type: pfam
Location: 118450 - 119718 (-)
Gene ID: Rep_77_c_12_85
Type: CAZyme
Location: 119919 - 121283 (+)
Type: CAZyme
Location: 119919 - 121283 (+)
Gene ID: Rep_77_c_12_86
Type: CAZyme
Location: 121397 - 122506 (+)
Type: CAZyme
Location: 121397 - 122506 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp007896885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.