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Cluster: Rep_77_CGC69

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_77_c_80 Rep_77_c_80_52 44380 45891 + 4.C.1.1.7
pfam Rep_77_c_80 Rep_77_c_80_53 45978 46787 + Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
CAZyme Rep_77_c_80 Rep_77_c_80_54 46821 47738 + GT2
NULL(UNKNOWN) Rep_77_c_80 Rep_77_c_80_55 47735 49030 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) Rep_77_c_80 Rep_77_c_80_56 49037 49987 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_77_c_80 Rep_77_c_80_57 50002 50835 + GT11
CAZyme Rep_77_c_80 Rep_77_c_80_58 50839 51681 + GT2
CAZyme Rep_77_c_80 Rep_77_c_80_59 51691 52833 + GT4
Gene ID: Rep_77_c_80_52
Type: TC
Location: 44380 - 45891 (+)
Gene ID: Rep_77_c_80_53
Type: pfam
Location: 45978 - 46787 (+)
Gene ID: Rep_77_c_80_54
Type: CAZyme
Location: 46821 - 47738 (+)
Gene ID: Rep_77_c_80_55
Type:
Location: 47735 - 49030 (+)
Gene ID: Rep_77_c_80_56
Type:
Location: 49037 - 49987 (+)
Gene ID: Rep_77_c_80_57
Type: CAZyme
Location: 50002 - 50835 (+)
Gene ID: Rep_77_c_80_58
Type: CAZyme
Location: 50839 - 51681 (+)
Gene ID: Rep_77_c_80_59
Type: CAZyme
Location: 51691 - 52833 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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