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Cluster: Rep_77_CGC63

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_77_c_66 Rep_77_c_66_44 55956 59330 + 1.B.14.6.1
pfam Rep_77_c_66 Rep_77_c_66_45 59343 61247 + SusD_RagB | SusD-like_3
pfam Rep_77_c_66 Rep_77_c_66_46 61278 62699 + SusE
CAZyme Rep_77_c_66 Rep_77_c_66_47 62737 63762 + GH43_3
NULL(UNKNOWN) Rep_77_c_66 Rep_77_c_66_48 63791 64246 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_77_c_66 Rep_77_c_66_49 64582 67104 + GH31_15
CAZyme Rep_77_c_66 Rep_77_c_66_50 67123 69558 + GH3
pfam Rep_77_c_66 Rep_77_c_66_51 69708 70187 - dCMP_cyt_deam_1 | dCMP_cyt_deam_2
CAZyme Rep_77_c_66 Rep_77_c_66_52 70285 71190 + GH73
Gene ID: Rep_77_c_66_44
Type: TC
Location: 55956 - 59330 (+)
Gene ID: Rep_77_c_66_45
Type: pfam
Location: 59343 - 61247 (+)
Gene ID: Rep_77_c_66_46
Type: pfam
Location: 61278 - 62699 (+)
Gene ID: Rep_77_c_66_47
Type: CAZyme
Location: 62737 - 63762 (+)
Gene ID: Rep_77_c_66_48
Type:
Location: 63791 - 64246 (+)
Gene ID: Rep_77_c_66_49
Type: CAZyme
Location: 64582 - 67104 (+)
Gene ID: Rep_77_c_66_50
Type: CAZyme
Location: 67123 - 69558 (+)
Gene ID: Rep_77_c_66_51
Type: pfam
Location: 69708 - 70187 (-)
Gene ID: Rep_77_c_66_52
Type: CAZyme
Location: 70285 - 71190 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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