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Cluster: Rep_77_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_77_c_59 Rep_77_c_59_2 1768 4020 - GH3
CAZyme Rep_77_c_59 Rep_77_c_59_3 4036 5397 - GH16_3
NULL(UNKNOWN) Rep_77_c_59 Rep_77_c_59_4 5522 6922 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_77_c_59 Rep_77_c_59_5 6954 8531 - SusD_RagB | SusD-like_3
TC Rep_77_c_59 Rep_77_c_59_6 8554 11793 - 1.B.14.6.1
pfam Rep_77_c_59 Rep_77_c_59_7 12143 14347 - DUF5686
TF Rep_77_c_59 Rep_77_c_59_8 14480 15181 + 0038753
CAZyme Rep_77_c_59 Rep_77_c_59_9 15272 17719 + GH20
STP Rep_77_c_59 Rep_77_c_59_10 17893 18837 - Pyr_redox_2
pfam Rep_77_c_59 Rep_77_c_59_11 18921 19580 - LolA_2
TC Rep_77_c_59 Rep_77_c_59_12 19620 22130 - 3.A.12.1.1
Gene ID: Rep_77_c_59_2
Type: CAZyme
Location: 1768 - 4020 (-)
Gene ID: Rep_77_c_59_3
Type: CAZyme
Location: 4036 - 5397 (-)
Gene ID: Rep_77_c_59_4
Type:
Location: 5522 - 6922 (-)
Gene ID: Rep_77_c_59_5
Type: pfam
Location: 6954 - 8531 (-)
Gene ID: Rep_77_c_59_6
Type: TC
Location: 8554 - 11793 (-)
Gene ID: Rep_77_c_59_7
Type: pfam
Location: 12143 - 14347 (-)
Gene ID: Rep_77_c_59_8
Type: TF
Location: 14480 - 15181 (+)
Gene ID: Rep_77_c_59_9
Type: CAZyme
Location: 15272 - 17719 (+)
Gene ID: Rep_77_c_59_10
Type: STP
Location: 17893 - 18837 (-)
Gene ID: Rep_77_c_59_11
Type: pfam
Location: 18921 - 19580 (-)
Gene ID: Rep_77_c_59_12
Type: TC
Location: 19620 - 22130 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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