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Cluster: Rep_77_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_77_c_58 Rep_77_c_58_24 33161 36163 + GH3
CAZyme Rep_77_c_58 Rep_77_c_58_25 36326 39433 + GH3
TC Rep_77_c_58 Rep_77_c_58_26 39441 40442 - 8.A.5.1.3
CAZyme Rep_77_c_58 Rep_77_c_58_27 40646 41866 + GH27
CAZyme Rep_77_c_58 Rep_77_c_58_28 41904 44198 + GH3
TF Rep_77_c_58 Rep_77_c_58_29 44509 45396 + HTH_AraC
CAZyme Rep_77_c_58 Rep_77_c_58_30 45511 46797 + GH5_7
TC Rep_77_c_58 Rep_77_c_58_31 47117 50203 + 1.B.14.6.1
Gene ID: Rep_77_c_58_24
Type: CAZyme
Location: 33161 - 36163 (+)
Gene ID: Rep_77_c_58_25
Type: CAZyme
Location: 36326 - 39433 (+)
Gene ID: Rep_77_c_58_26
Type: TC
Location: 39441 - 40442 (-)
Gene ID: Rep_77_c_58_27
Type: CAZyme
Location: 40646 - 41866 (+)
Gene ID: Rep_77_c_58_28
Type: CAZyme
Location: 41904 - 44198 (+)
Gene ID: Rep_77_c_58_29
Type: TF
Location: 44509 - 45396 (+)
Gene ID: Rep_77_c_58_30
Type: CAZyme
Location: 45511 - 46797 (+)
Gene ID: Rep_77_c_58_31
Type: TC
Location: 47117 - 50203 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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