dbCAN Logo

Cluster: Rep_77_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_77_c_54 Rep_77_c_54_11 7841 10009 - GH89
CAZyme Rep_77_c_54 Rep_77_c_54_12 10431 12659 + GH89
pfam Rep_77_c_54 Rep_77_c_54_13 12699 14507 + MutS_V | MutS_III
pfam Rep_77_c_54 Rep_77_c_54_14 14515 15810 - OEP | OEP
TC Rep_77_c_54 Rep_77_c_54_15 15807 18857 - 2.A.6.2.33
TC Rep_77_c_54 Rep_77_c_54_16 18868 19926 - 2.A.6.2.32
pfam Rep_77_c_54 Rep_77_c_54_17 20372 21553 + DUF3089
TC Rep_77_c_54 Rep_77_c_54_18 21550 22563 + 9.B.33.1.2
Gene ID: Rep_77_c_54_11
Type: CAZyme
Location: 7841 - 10009 (-)
Gene ID: Rep_77_c_54_12
Type: CAZyme
Location: 10431 - 12659 (+)
Gene ID: Rep_77_c_54_13
Type: pfam
Location: 12699 - 14507 (+)
Gene ID: Rep_77_c_54_14
Type: pfam
Location: 14515 - 15810 (-)
Gene ID: Rep_77_c_54_15
Type: TC
Location: 15807 - 18857 (-)
Gene ID: Rep_77_c_54_16
Type: TC
Location: 18868 - 19926 (-)
Gene ID: Rep_77_c_54_17
Type: pfam
Location: 20372 - 21553 (+)
Gene ID: Rep_77_c_54_18
Type: TC
Location: 21550 - 22563 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List