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Cluster: Rep_77_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_77_c_51 Rep_77_c_51_92 141830 143689 - 2.A.47.4.8
NULL(UNKNOWN) Rep_77_c_51 Rep_77_c_51_93 143812 146433 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_77_c_51 Rep_77_c_51_94 146682 148823 + GH92
TC Rep_77_c_51 Rep_77_c_51_95 149226 152507 + 1.B.14.6.1
pfam Rep_77_c_51 Rep_77_c_51_96 152526 154415 + SusD_RagB | SusD-like_3
CAZyme Rep_77_c_51 Rep_77_c_51_97 154914 157283 + GH3
CAZyme Rep_77_c_51 Rep_77_c_51_98 157305 160472 + GH38
Gene ID: Rep_77_c_51_92
Type: TC
Location: 141830 - 143689 (-)
Gene ID: Rep_77_c_51_93
Type:
Location: 143812 - 146433 (-)
Gene ID: Rep_77_c_51_94
Type: CAZyme
Location: 146682 - 148823 (+)
Gene ID: Rep_77_c_51_95
Type: TC
Location: 149226 - 152507 (+)
Gene ID: Rep_77_c_51_96
Type: pfam
Location: 152526 - 154415 (+)
Gene ID: Rep_77_c_51_97
Type: CAZyme
Location: 154914 - 157283 (+)
Gene ID: Rep_77_c_51_98
Type: CAZyme
Location: 157305 - 160472 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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