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Cluster: Rep_77_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_77_c_51 Rep_77_c_51_52 73578 74258 - 2.A.88.8.4
TF Rep_77_c_51 Rep_77_c_51_53 74689 78684 + HTH_AraC
sulfatase Rep_77_c_51 Rep_77_c_51_54 78924 81428 + S1_4
CAZyme Rep_77_c_51 Rep_77_c_51_55 81557 82645 + GH43_26
CAZyme Rep_77_c_51 Rep_77_c_51_56 82771 83781 + GH43_34
CAZyme Rep_77_c_51 Rep_77_c_51_57 83811 84920 + GH76
CAZyme Rep_77_c_51 Rep_77_c_51_58 84963 87446 + GH43
CAZyme Rep_77_c_51 Rep_77_c_51_59 87451 89742 + GH92
Gene ID: Rep_77_c_51_52
Type: TC
Location: 73578 - 74258 (-)
Gene ID: Rep_77_c_51_53
Type: TF
Location: 74689 - 78684 (+)
Gene ID: Rep_77_c_51_54
Type: sulfatase
Location: 78924 - 81428 (+)
Gene ID: Rep_77_c_51_55
Type: CAZyme
Location: 81557 - 82645 (+)
Gene ID: Rep_77_c_51_56
Type: CAZyme
Location: 82771 - 83781 (+)
Gene ID: Rep_77_c_51_57
Type: CAZyme
Location: 83811 - 84920 (+)
Gene ID: Rep_77_c_51_58
Type: CAZyme
Location: 84963 - 87446 (+)
Gene ID: Rep_77_c_51_59
Type: CAZyme
Location: 87451 - 89742 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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