Cluster: Rep_77_CGC46
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 7
- Substrate:
- Genome ID: Rep_77
- CGC Family ID: CGCFAM_08765
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_77_c_47 | Rep_77_c_47_188 | 237568 | 241002 | + | CE4 | GH18 | GT2 |
| TC | Rep_77_c_47 | Rep_77_c_47_189 | 241662 | 243500 | - | 3.A.1.106.1 |
| pfam | Rep_77_c_47 | Rep_77_c_47_190 | 243804 | 244901 | + | MACPF |
| TC | Rep_77_c_47 | Rep_77_c_47_191 | 244972 | 246303 | + | 1.C.39.13.2 |
| NULL(UNKNOWN) | Rep_77_c_47 | Rep_77_c_47_192 | 246547 | 246717 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_77_c_47 | Rep_77_c_47_193 | 246946 | 247779 | + | GT2 |
| CAZyme | Rep_77_c_47 | Rep_77_c_47_194 | 247785 | 248885 | + | GT4 |
| CAZyme | Rep_77_c_47 | Rep_77_c_47_195 | 248896 | 249729 | + | GT2 |
| CAZyme | Rep_77_c_47 | Rep_77_c_47_196 | 249709 | 250704 | - | GT2 |
| pfam | Rep_77_c_47 | Rep_77_c_47_197 | 250721 | 251794 | - | Glyphos_transf |
| pfam | Rep_77_c_47 | Rep_77_c_47_198 | 252087 | 252692 | + | DUF4254 |
| CAZyme | Rep_77_c_47 | Rep_77_c_47_199 | 252689 | 253711 | + | GT9 |
| pfam | Rep_77_c_47 | Rep_77_c_47_200 | 253711 | 254451 | + | Kdo |
| CAZyme | Rep_77_c_47 | Rep_77_c_47_201 | 254497 | 255222 | + | GT2 |
Gene ID: Rep_77_c_47_188
Type: CAZyme
Location: 237568 - 241002 (+)
Type: CAZyme
Location: 237568 - 241002 (+)
Gene ID: Rep_77_c_47_189
Type: TC
Location: 241662 - 243500 (-)
Type: TC
Location: 241662 - 243500 (-)
Gene ID: Rep_77_c_47_190
Type: pfam
Location: 243804 - 244901 (+)
Type: pfam
Location: 243804 - 244901 (+)
Gene ID: Rep_77_c_47_191
Type: TC
Location: 244972 - 246303 (+)
Type: TC
Location: 244972 - 246303 (+)
Gene ID: Rep_77_c_47_192
Type:
Location: 246547 - 246717 (+)
Type:
Location: 246547 - 246717 (+)
Gene ID: Rep_77_c_47_193
Type: CAZyme
Location: 246946 - 247779 (+)
Type: CAZyme
Location: 246946 - 247779 (+)
Gene ID: Rep_77_c_47_194
Type: CAZyme
Location: 247785 - 248885 (+)
Type: CAZyme
Location: 247785 - 248885 (+)
Gene ID: Rep_77_c_47_195
Type: CAZyme
Location: 248896 - 249729 (+)
Type: CAZyme
Location: 248896 - 249729 (+)
Gene ID: Rep_77_c_47_196
Type: CAZyme
Location: 249709 - 250704 (-)
Type: CAZyme
Location: 249709 - 250704 (-)
Gene ID: Rep_77_c_47_197
Type: pfam
Location: 250721 - 251794 (-)
Type: pfam
Location: 250721 - 251794 (-)
Gene ID: Rep_77_c_47_198
Type: pfam
Location: 252087 - 252692 (+)
Type: pfam
Location: 252087 - 252692 (+)
Gene ID: Rep_77_c_47_199
Type: CAZyme
Location: 252689 - 253711 (+)
Type: CAZyme
Location: 252689 - 253711 (+)
Gene ID: Rep_77_c_47_200
Type: pfam
Location: 253711 - 254451 (+)
Type: pfam
Location: 253711 - 254451 (+)
Gene ID: Rep_77_c_47_201
Type: CAZyme
Location: 254497 - 255222 (+)
Type: CAZyme
Location: 254497 - 255222 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp007896885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.