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Cluster: Rep_77_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_77_c_42 Rep_77_c_42_28 35989 38685 + GH77
pfam Rep_77_c_42 Rep_77_c_42_29 38911 39279 + FolB
CAZyme Rep_77_c_42 Rep_77_c_42_30 39450 40232 - GH23
pfam Rep_77_c_42 Rep_77_c_42_31 40511 41029 - MGS
CAZyme Rep_77_c_42 Rep_77_c_42_32 41075 42085 - GT2
pfam Rep_77_c_42 Rep_77_c_42_33 42078 42977 - Lip_A_acyltrans
pfam Rep_77_c_42 Rep_77_c_42_34 42994 44328 - UPF0004 | Radical_SAM
TC Rep_77_c_42 Rep_77_c_42_35 44329 46071 + 4.C.1.1.4
Gene ID: Rep_77_c_42_28
Type: CAZyme
Location: 35989 - 38685 (+)
Gene ID: Rep_77_c_42_29
Type: pfam
Location: 38911 - 39279 (+)
Gene ID: Rep_77_c_42_30
Type: CAZyme
Location: 39450 - 40232 (-)
Gene ID: Rep_77_c_42_31
Type: pfam
Location: 40511 - 41029 (-)
Gene ID: Rep_77_c_42_32
Type: CAZyme
Location: 41075 - 42085 (-)
Gene ID: Rep_77_c_42_33
Type: pfam
Location: 42078 - 42977 (-)
Gene ID: Rep_77_c_42_34
Type: pfam
Location: 42994 - 44328 (-)
Gene ID: Rep_77_c_42_35
Type: TC
Location: 44329 - 46071 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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